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biopython

synthetic-sciences/openscienceSkill

Comprehensive molecular biology toolkit. Use for sequence manipulation, file parsing (FASTA/GenBank/PDB), phylogenetics, and programmatic NCBI/PubMed access (Bio.Entrez). Best for batch processing, custom bioinformatics pipelines, BLAST automation. For quick lookups use gget; for multi-service integration use bioservices.

ScannedSkillSource: GitHub
4,120 stars +170 this week Updated 17d ago License Apache-2.0 Context ≈83 tokens always loaded
75popular

Why this score

Stars18/35
Usage (forks)7/15
Upkeep25/25
License15/15
Owner history10/10

This repo hosts 10 skills, so its 4,120 stars are split between them (about 412 each) for scoring.

Popularity score: 75/100 from public GitHub signals only. It shows how widely used and maintained this is, not how well it works. Not included yet: the fake-star check. The security scan is shown separately and doesn't change the score. How we rank

Security

Scanned Oct 21, 2026 at commit 493f9261f94b, with Cisco's open-source skill-scanner.

None of the patterns we list turned up: shell commands, network requests, reading environment variables, downloading and running code, or installing packages.

A scan lists patterns in the code. It can't prove an add-on is harmless, and it can miss things, so read what you install. How we scan

Alternatives

Other makers' add-ons that do the same job, next to this one.

NameScoreStarsContextUpdated
This onebiopython synthetic-sciences/openscience · Skill 75★ 4.1k≈83 always17d ago
alterlab-biopython AlterLab-IEU/AlterLab-Academic-Skills · Skill Same job: research & papers 55★ 76≈120 always21d ago
biology-biopython aiming-lab/AutoResearchClaw · Skill Both about biopython and biology 77★ 15k≈47 always3mo ago