anndata
synthetic-sciences/openscienceSkill
Data structure for annotated matrices in single-cell analysis. Use when working with .h5ad files or integrating with the scverse ecosystem. This is the data format skill—for analysis workflows use scanpy; for probabilistic models use scvi-tools; for population-scale queries use cellxgene-census.
Why this score
This repo hosts 10 skills, so its 4,120 stars are split between them (about 412 each) for scoring.
Popularity score: 75/100 from public GitHub signals only. It shows how widely used and maintained this is, not how well it works. Not included yet: the fake-star check. The security scan is shown separately and doesn't change the score. How we rank
Security
Scanned Oct 21, 2026 at commit 493f9261f94b, with Cisco's open-source skill-scanner.
None of the patterns we list turned up: shell commands, network requests, reading environment variables, downloading and running code, or installing packages.
A scan lists patterns in the code. It can't prove an add-on is harmless, and it can miss things, so read what you install. How we scan
Alternatives
Other makers' add-ons that do the same job, next to this one.
| Name | Score | Stars | Context | Updated |
|---|---|---|---|---|
| This oneanndata synthetic-sciences/openscience · Skill | 75 | ★ 4.1k | ≈76 always | 17d ago |
| alterlab-anndata AlterLab-IEU/AlterLab-Academic-Skills · Skill Both about anndata and scverse | 55 | ★ 76 | ≈144 always | 21d ago |